Private Project Seminar - Molecular Evolutionary Computing(MEC), 2005

Participants

D.-Y. Cho, S.-Y. Shin, H.-W. Lim, I.-H. Lee, J.-Y. Lee, J.-Y. Park,

H.-Y. Jang, S. D. Kim, J.-S. Kim, D.-Y. Lee, K.-Y. Lee, H.-S. Seok

K.-Y. Kim, S.-H. Lee

Date

Title

Speaker

Jul. 4

*Recognizing DNA splicing
*Simple operations for gene assembly 
*Counting time in computing with cells

K.-Y. Kim[PPT]
J.- S. Kim[PPT]
J.-Y. Park[PPT]

Jul. 11

*On bounded symport/antiport P systems
*Expectation and variance of self-assembled graph structures
* Intensive in vitro experiments of implementing and executing finite automata in test tube

H.-S. Seok[PPT]
S.-Y. Shin[PPT]

D.-Y. Lee[PPT]

Jul. 18

*Development of an in vivo computer based on Escherichia coli
*Control of DNA molecules on a microscopic bead using optical techniques for photonic DNA memory
Linearizer and Doubler: Two mappings to unify molecular computing models based on DNA complementarity

S.-H. Lee[PPT]

I.-H. LEE[PPT]

H.-W. Lim[PPT]


 

Jul. 25

*Complexity of graph self-assembly in accretive systems and self-destructible systems
*A self-assembly model of time-dependent glue strength
* Complexity of compact proofreading for self-assembled patterns

H.-Y. Jang[PPT]

D.-Y. Cho[PPT]
K.-Y. Kim[PPT]
 

Aug. 1

*A microfluidic device for DNA tile self-assembly
*Photo- and thermoregulation of DNA nanomachines
* A poor man's microfluidic DNA computer

J.-S. Kim [PPT]
J.-Y. Park[PPT]
 H.-S. Seok[PPT]

Aug. 8

*Two proteins for the price of one: The design of maximally compressed coding sequences
*Use of DNA nanodevices in modulating the mechanical properties of polyacrylamide gels
* Molecular learning of wDNF formulae

S.-Y. Shin[PPT]

 D.-Y. Lee[PPT]

 S.-H. Lee[PPT]

Aug. 22

*Self-correcting self-assembly: Growth models and the hammersley process
*On computational properties of template-guided DNA recombination
* Towards practical biomolecular computers using microfluidic deoxyribozyme logic gate networks

I.-H. LEE[PPT]

 H.-W. Lim[PPT]

 H.-Y. Jang[PPT]
 

Aug. 29

*DNA recombinant by XPCR
*An algorithm for SAT without an extraction phase
*Sensitivity and capacity of microarray encodings

D.-Y. Cho[PPT]
 K.-Y. Kim[PPT]
 J.-S. Kim [PPT]

Sep. 5

*Hairpin structures in DNA words
*Efficient algorithm for testing structure freeness of finite set of biomolecular sequences
* Communicating distributed H systems: optimal results with efficient ways of communication

H.-S. Seok[PPT]
 S.-Y. Shin[PPT]

D.-Y. Lee[PPT]
 

Sep. 12

*Non-preserving splicing with delay
*Analysis and simulation of dynamics in probabilistic P systems
*Experimental validation of DNA sequences for DNA computing: use of a SYBR green assay

 S.-H. Lee[PPT]

 I.-H. LEE[PPT]
H.-W. Lim [PPT]
 

Sep. 26

*Designing nucleotide sequences for computation: a survey of constraints
*Chain reaction systems based on loop dissociation of DNA
*A local search based barrier height estimation algorithm for DNA molecular transitions

 H.-Y. Jang[PPT]

D.-Y. Cho[PPT]

K.-Y. Kim [PPT]
 


This page is maintained by Ha-Young Jang(hyjang(at)bi.snu.ac.kr).
Last update: 2005-03-23