A Combined Experimental and Computational Strategy to Define Protein Interaction Networks for Peptide Recognition Modules

A comprehensive two-hybrid analysis to explore the yeast protein interactome

A Genomic Regulatory Network for Development

A module map showing conditional activity of expression modules in cancer

A new dynamic Bayesian network (DBN) approach for identifying gene regulatory networks from time course microarray data

A Probabilistic Functional Network of Yeast Genes

A quantitative protein interaction network for the ErbB receptors using protein microarrays

A simple rule for the evolution of cooperation on graphs and social networks

A synthetic oscillatory network of transcriptional regulators

A systematic approach to reconstructing transcription networks in Saccharomyces cerevisiae

A transcription factor response element for gene expression during circadian night

Assigning numbers to the arrows: Parameterizing a gene regulation network by using accurate expression kinetics

Asymmetric Coevolutionary Networks Facilitate Biodiversity Maintenance

Bayesian error analysis model for reconstructing transcriptional regulatory networks

Circuit diagrams for biological networks

Comparative assessment of large-scale data sets of protein–protein interactions

Computational inference of transcriptional regulatory networks from expression profiling and transcription factor binding site identification

Construction of a genetic toggle switch in Escherichia coli

Content-rich biological network constructed by mining PubMed abstracts

Deciphering principles of transcription regulation in eukaryotic genomes

Emergent Properties of Networks of Biological Signaling Pathways

Engineered gene circuits

Engineering stability in gene networks by autoregulation

Evolutionary Rate in the Protein Interaction Network

Formation of Regulatory Patterns During Signal Propagation in a Mammalian Cellular Network

Functional organization of the yeast proteome by systematic analysis of protein complexes

Gene networks: how to put the function in genomics

Global Analysis of the Genetic Network Controlling a Bacterial Cell Cycle

Hierarchical Organization of Modularity in Metabolic Networks

Identifying regulatory networks by combinatorial analysis of promoter elements

Integrated Genomic and Proteomic Analyses of a Systematically Perturbed Metabolic Network

Lethality and centrality in protein networks

Measures of degeneracy and redundancy in biological networks

Metabolic network structure determines key aspects of functionality and regulation

Modeling cellular machinery through biological network comparison

Network Motifs: Simple Building Blocks of Complex Networks

Neutralizing noise in gene networks

Probabilistic model of the human protein-protein interaction network

Regulatory Network of Escherichia coli: Consistency Between Literature Knowledge and Microarray Profile

Reverse engineering gene networks using singular value decomposition and robust regression

Reverse Engineering of regulatory networks in human B cells

Reverse Engineering the Gap Gene Network of Drosophila melanogaster

Robustness in simple biochemical networks

Robustness of the BMP morphogen gradient in Drosophila embryonic patterning

Signal Processing in Single Cells

Specificity and robustness in transcription control networks

specificity and stability in topology of protein networks

Stochastic models for regulatory networks of the genetic toggle switch

Synthetic Gene Network for Entraining and Amplifying Cellular Oscillations

The American Physical Society

The identification of functional modules from the genomic association of genes

The large-scale organization of metabolic networks

The segment polarity network is a robust developmental module

The underlying pathway structure of biochemical reaction networks

Transcriptional Regulatory Networks in Saccharomyces cerevisiae

Uncovering a Hidden Distributed Architecture Behind Scale-free Transcriptional Regulatory Networks

J. Mol. Biol.

Untangling the wires: A strategy to trace functional interactions in signaling and gene networks

Visualization of biochemical networks in living cells

Weak pairwise correlations imply strongly correlated network states in a neural population