ISMB 2006 Paper Seminar

Time and Place

Time: 10:30 - 12:30, Tue. / 3:00 - 5:00, Fri.
Place: 138 - 415 seminar room

Date Title Speaker
09/05
Tue.
- CONTRAfold: RNA secondary structure prediction without physics-based models
- A probabilistic approach to protein backbone tracing in electron density maps
- Finding the evidence for protein-protein interactions from PubMed abstracts
- Computational inference of the molecular logic for synaptic connectivity in C. elegans
J.-W. Nam
J.-S. Kim
S. Kim
J. -H. Kim
09/08
Fri.
- Predicting the prognosis of breast cancer by integrating clinical and microarray data with Bayesian networks
- Comparative footprinting of DNA-binding proteins
- ARTS: accurate recognition of transcription starts in human
- A decompositional approach to parameter estimation in pathway modeling: a case study of the Akt and MAPK pathways and their crosstalk
J.-G. Joung
K.-A. Yang
Y. -K. Noh
J. -H. Lee

09/12
Tue.
- Integrating image data into biomedical text categorization
- Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle
- Dense subgraph computation via stochastic search: application to detect transcriptional modules
- An ontology for Robot Scientist
S. Kim
J. -S. Kim
J. -K. Rhee
J. -H. Kim

09/19
Tue.
- Identifying cycling genes by combining sequence homology and expression data
- Comparative genomics reveals unusually long motifs in mammalian genomes
- An integrative approach for causal gene identification and gene regulatory pathway inference
- Create and assess protein networks through molecular characteristics of individual proteins
K. -A. Yang
S. -J. Kim
J. -W. Nam
J. -G. Joung

09/22
Fri.
- Context-specific independence mixture modeling for positional weight matrices
- Statistical mechanical modeling of genome-wide transcription factor occupancy data by MatrixREDUCE
- Accessing bioscience images from abstract sentences
-
J. -K. Rhee
J. -S. Kim
S. Kim
Y. -K. Noh
09/26
Tue.
- Inferring Functional Pathways from Multi-Perturbation Data
- Hairpins in a Haystack: recognizing microRNA precursors in comparative genomics data
- Quantification of transcription factor expression from Arabidopsis images
- MotifCut: regulatory motifs finding with maximum density subgraphs

J. -G. Joung
J. -W. Nam
K. -A. Yang
S. -J. Kim

09/29
Fri.
- An equilibrium partitioning model connecting gene expression and cis-motif content
-Semi-supervised analysis of gene expression profiles for lineage-specific development in the Caenorhabditis elegans embryo
-A sequence-based filtering method for ncRNA identification and its application to searching for riboswitch elements
- Bistable switching and excitable behaviour in the activation of Src at mitosis
J. -K. Rhee
S. -J. Kim
J. -H. Kim
J. -H. Lee

+ paper downloads: Here!

This page is maintained by Soo-Jin Kim(sjkim@bi.snu.ac.kr)
Last update: 2006-08-31
กก