PIE: an online prediction system for protein-protein interactions from text

Sorry, PIE [1] is no long supported due to server maintenance issues. As an alternative, PIE the search [2] is available. PIE the search is a web service for searching PPI informative articles from PubMed, and it is based on a winning approach [3] in the BioCreative III ACT competition.

URL: http://www.ncbi.nlm.nih.gov/IRET/PIE

References [1] PIE: an online prediction system for protein-protein interactions from text, S. Kim, S.-Y. Shin, I.-H. Lee, S.-J. Kim, R. Sriram, and B.-T. Zhang, Nucleic Acids Research, 36, W411-W415, 2008. [2] PIE the search: searching PubMed literature for protein interaction information, S. Kim, D. Kwon, S.-Y. Shin, and W. J. Wilbur, Bioinformatics, 28(4), pp. 597-598, 2012. [3] Classifying protein-protein interaction articles using word and syntactic features, S. Kim and W. J. Wilbur, BMC Bioinformatics, 12(Suppl 8), S9, 2011.

Updated: Apr. 1, 2016